Protists, the primary source of genomic diversity in eukaryotes

Authors

  • Ramon Massana Institut de Ciències del Mar (CSIC)
  • Ramiro Logares Institut de Ciències del Mar (CSIC)
  • David López-Escardó Institut de Ciències del Mar (CSIC)
  • Javier del Campo Institut de Biologia Evolutiva (CSIC - Universitat Pompeu Fabra)

Keywords:

biodiversity, ecology, evolution, genomics, protists.

Abstract

Genomics, which unravels the DNA sequence of species, is an expanding discipline thanks to new sequencing tools. Initiatives aimed at obtaining the genomes of all living species often overlook protists, which are unicellular eukaryotes that are crucial for understanding the evolution of life and the functioning of ecosystems. In this paper we review what is known about protist genomics, often on the basis of cultured species, and present new ways to obtain the genomes of uncultured species, which represent a large part of eukaryotic diversity. We then present some examples of how protist genomics is crucial to address key issues in evolution and ecology, such as the origin of the eukaryotes, the acquisition and expansion of chloroplasts, the emergence of multicellularity, symbiotic events, the study of biogeochemical activities on the basis of functional genes, and population genetics. This paper seeks to highlight the vast diversity of protists and to underscore the fact that they should be given greater consideration in genomic studies.

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